Genomics and Bioinformatics

The Genomics and Bioinformatics core lab supports genome science research by providing access to analytical expertise and state-of-the-art computational infrastructure. Core staff are also available to train junior researchers in bioinformatics techniques The lab is supported by the Kansas INBRE, a statewide research and training grant from the National Institutes of Health.

  • RNA-seq analysis
  • Genome assembly (via a reference sequence or de novo)
  • Variant calling and mutation detection
  • ChIP-seq analysis
  • Restriction-site Associated DNA sequencing (RAD-seq) analysis
  • Train junior researchers in bioinformatics techniques
Stuart Macdonald, Ph.D.
Haworth Hall, room 4043
785-864-5362
sjmac@ku.edu

LINKS TO LAB WEBSITES

Biochemistry & Protein Science

Bioinformatics & Modeling

Cross-Disciplinary

Materials Characterization

Molecular Structures

Translational Biology

EVENTS
Ability to set up 24 NMR experiments at one time and eliminate periodic user intervention
Screen up to 100,000 compounds in two days for endpoint assays
Next-generation genome sequencing
Near-infrared and bioluminescence imaging instrumentation to track gene of interest and/or tumor growth
Expertise in the design and stability of various pharmaceutical dosage forms
More than 40 computational chemistry software programs and databases
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